Bioinformatics & Data Analysis Services

Transforming Biological Data into Meaningful Scientific Insights

In this data-driven era, biological research generates massive datasets that require specialized computational expertise for accurate interpretation. At PenScriber, our Bioinformatics & Data Analysis Support Services empower researchers, scholars, and institutions to unlock the full potential of their data through advanced computational biology, molecular modeling, and statistical analysis.

Whether you're working on genomics, proteomics, drug discovery, or molecular interaction studies, we combine scientific precision with technical excellence to help you derive robust, publication-ready insights.

Core Data Analysis Services

1

Virtual Screening, Molecular Docking & MD Simulation

We perform high-precision molecular docking and molecular dynamics (MD) simulations to explore and validate protein–ligand interactions at the atomic level. Using state-of-the-art tools like MOE, AutoDock, GROMACS, and AMBER, our analyses provide detailed insights into binding affinities, conformational stability, and interaction energy profiles.

✅ Includes:

  • Virtual screening of compound libraries
  • ADME profiling
  • Toxicity prediction
  • Pritein & Lignad Prepurposing and optimization
  • Proteins & Ligand Visualization in PyMOL & DS Studio
  • Molecular Docking, 2D & 3D interaction analysis
  • MD simulation, trajectory and post-MD analyses
2

Protein–Ligand Interaction Analysis

Our experts generate detailed interaction maps highlighting hydrogen bonds, hydrophobic contacts, electrostatic interactions, and binding residues using visualization tools such as PyMOL, Discovery Studio, and LigPlot+.

These analyses help validate docking results and strengthen the molecular rationale of your research manuscripts.

✅ Includes:

  • Bingind site identification
  • Hydrophilic, hydrophobic, and electrostatic interaction
  • Comparative docking analysis acrross ligands
  • Interaction energy computation
  • RMSD and RMSF analysis
  • Publication-ready figures and tables
3

Pathway & Network Analysis

We help you identify the bigger biological picture by constructing molecular pathways and interaction networks that explain your experimental findings.

✅ Includes:

  • KEGG and Reactome pathway enrichment
  • STRING and Cytoscape-based network visualization
  • Hub gene and target identification
  • Functional annotation and ontology mapping
  • Comprehensive biological interpretation
4

Genomic & Transcriptomic Data Analysis

From raw sequence reads to biological interpretation, we deliver end-to-end NGS data analysis pipelines using industry-standard tools and databases (NCBI, Ensembl, GEO).

Our bioinformatics workflows are fully reproducible, documented, and publication-compliant. We provide detailed analytical reports, visual outputs, and interpretation ready for manuscript submission.

✅ Includes:

  • RNA-Seq, DNA-Seq, and microarray analysis
  • Differential gene expression (DEG) analysis
  • Gene expression profiling and normalization
  • Gene ontology and pathway enrichment
  • Variant calling and functional annotation
  • Differential expression and clustering analysis
  • GO and KEGG pathway enrichment
  • Heatmaps, volcano plots, and clustering visualization
5

Computational Workflow Assistance

We support researchers in setting up and running custom computational pipelines — whether for molecular docking, molecular dynamics (MD) simulations, or bioinformatics workflows. Our team assists in developing reproducible, automated, and scalable pipelines that ensure consistency, accuracy, and efficiency across computational experiments.

With PenScriber’s workflow design expertise, your computational research becomes traceable, transparent, and publication-ready. we help researchers save time, reduce manual errors, and maintain full reproducibility of their analyses.

✅ Includes:

  • Workflow design and parameter optimization
  • Scripting automation (Bash, Python, R)
  • Data management and reproducible workflow design
  • Report generation and result reproducibility
  • Assistance with HPC or cloud computing setup
6

Statistical Data Analysis (SPSS, R, GraphPad Prism)

We provide comprehensive statistical support for biological and other datasets, ensuring that every analysis is accurate, reproducible, and scientifically meaningful. We assist in data cleaning, hypothesis testing, regression modeling, and graphical interpretation, tailoring each analysis to the specific research design and objectives.

We also deliver a comprehensive statistical report that includes detailed results, visualizations, and interpretation.

✅ Includes:

  • Hypothesis testing and data interpretation
  • Parametric & non-parametric tests
  • ANOVA, t-test, chi-square, correlation
  • Multivariate and regression modeling
  • Confidence intervals and p-value analysis
  • Data visualization (bar plots, box plots, scatter plots, etc.)
  • Graphical data visualization (GraphPad Prism, R)
  • Experimental design consultation

Why Choose PenScriber?

🎓

Professional Bioinformaticians

Leading in the field, PhD Scholar and professional bioinformatician and computational biologists

📚

End-to-end support

From data processing to result interpretation and visulalizations - all publication-ready

🔒

Confidentiality Assured

Complete privacy and data protection with transparent communication throughout the process

🎯

Custom Solutions

Tailored support for every stage of your research and writing journey

Ready to Transform Your Research into Publication?

Let our expert team help you achieve your research and publication goals

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